NOTE: Hosts and pathogens in bold denote those chosen for the field validation in work package 3.

APHAEA: key hosts

•    Red fox
•    Other wild carnivores (badger, racoon dog,..)
•    Wild boar
•    Roe deer (+ white tailed deer)
•    Cervinae (red deer, fallow deer)
•    Wild bovids (chamois, ibex, mouflon, barbary sheep, bison, muskoxen)
•    Rodents (Arvicola amphibius, Arvicola sapidus, Microtus arvalis, Myodes glareolus, Apodemus sylvaticus, Apodemus flavicollis, Mus musculus, Mus spretus, Rattus rattus, Rattus norvegivus)
•    Lagomorphs
•    Game birds
•    Other birds (waterfowl, dabbling ducks)

APHAEA: key pathogens

•    Anaplasma spp.  
•    African swine fever virus
•    Aujeszky’s disease virus
•    Bacillus anthracis
•    Bluetongue virus
•    Brucella abortus, B. melitensis, B. suis
•    Campylobacter jejuni
•    Classical swine fever virus
•    Coxiella burnetii
•    Echinococcus multilocularis
•    Encephalomyocarditis virus
•    European brown hare syndrome virus
•    Francisella tularensis
•    Hantavirus
•    Hepatitis E virus
•    Highly pathogenic avian influenza virus
•    Leptospira spp.
•    Listeria monocytogenes
•    Lymphocytic choriomeningitis virus
•    Mycobacterium avium paratuberculosis
•    Mycobacterium bovis
•    Neospora caninum
•    Pasteurella multocida
•    Pathogenic Escherichia coli
•    Rabies virus
•    Salmonella enteritidis, Salmonella typhimurium
•    Tick-borne encephalitis virus
•    Toxoplasma gondii
•    Trichinella spp.
•    West Nile virus